IL_3J9Z_132

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GG*UGACC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J9Z_132 not in the Motif Atlas

Homologous match to IL_4LFB_013

Geometric discrepancy: 0.2416

The information below is about IL_4LFB_013

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.3

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

6

Unit IDs

3J9Z|1|SA|G|292
3J9Z|1|SA|G|293
*
3J9Z|1|SA|U|304
3J9Z|1|SA|G|305
3J9Z|1|SA|A|306
3J9Z|1|SA|C|307
3J9Z|1|SA|C|308

Current chains

Chain SA

16S ribosomal RNA

Nearby chains

Chain SP

30S ribosomal protein S16