IL_3J9Z_135
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGAAGAAG*UGUAAAG
- Length
- 15 nucleotides
- Bulged bases
- 3J9Z|1|SA|A|412
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9Z_135 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.2045
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28026.3
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
3J9Z|1|SA|U|409
3J9Z|1|SA|G|410
3J9Z|1|SA|A|411
3J9Z|1|SA|A|412
3J9Z|1|SA|G|413
3J9Z|1|SA|A|414
3J9Z|1|SA|A|415
3J9Z|1|SA|G|416
*
3J9Z|1|SA|U|427
3J9Z|1|SA|G|428
3J9Z|1|SA|U|429
3J9Z|1|SA|A|430
3J9Z|1|SA|A|431
3J9Z|1|SA|A|432
3J9Z|1|SA|G|433
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain SD
- 30S ribosomal protein S4
Coloring options: