IL_3J9Z_137
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAGG*CGUUAC
- Length
- 11 nucleotides
- Bulged bases
- 3J9Z|1|SA|U|485
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9Z_137 not in the Motif Atlas
- Homologous match to IL_5J7L_022
- Geometric discrepancy: 0.1964
- The information below is about IL_5J7L_022
- Detailed Annotation
- tSH-tHW-tWW
- Broad Annotation
- No text annotation
- Motif group
- IL_88269.4
- Basepair signature
- cWW-tWW-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
3J9Z|1|SA|G|446
3J9Z|1|SA|G|447
3J9Z|1|SA|A|448
3J9Z|1|SA|G|449
3J9Z|1|SA|G|450
*
3J9Z|1|SA|C|483
3J9Z|1|SA|G|484
3J9Z|1|SA|U|485
3J9Z|1|SA|U|486
3J9Z|1|SA|A|487
3J9Z|1|SA|C|488
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain SD
- 30S ribosomal protein S4
- Chain SP
- 30S ribosomal protein S16
Coloring options: