IL_3J9Z_155

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUG*CGU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J9Z_155 not in the Motif Atlas

Geometric match to IL_5TBW_047

Geometric discrepancy: 0.1822

The information below is about IL_5TBW_047

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_52767.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

3J9Z|1|SA|G|836
3J9Z|1|SA|U|837
3J9Z|1|SA|G|838
*
3J9Z|1|SA|C|848
3J9Z|1|SA|G|849
3J9Z|1|SA|U|850

Current chains

Chain SA

16S ribosomal RNA

Nearby chains

Chain SB

30S ribosomal protein S2

Chain SR

30S ribosomal protein S18