IL_3J9Z_163

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUGCUGCAU*AUGGCC

Length

15 nucleotides

Bulged bases

3J9Z|1|SA|U|1049, 3J9Z|1|SA|C|1054

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9Z|1|SA|G|1048
3J9Z|1|SA|U|1049
3J9Z|1|SA|G|1050
3J9Z|1|SA|C|1051
3J9Z|1|SA|U|1052
3J9Z|1|SA|G|1053
3J9Z|1|SA|C|1054
3J9Z|1|SA|A|1055
3J9Z|1|SA|U|1056
*
3J9Z|1|SA|A|1204
3J9Z|1|SA|U|1205
3J9Z|1|SA|G|1206
3J9Z|1|SA|G|1207
3J9Z|1|SA|C|1208
3J9Z|1|SA|C|1209

Current chains

Chain SA

16S ribosomal RNA

Nearby chains

Chain SC

30S ribosomal protein S3

Chain SN

30S ribosomal protein S14