IL_3J9Z_176
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUCAC*GAAGUC
- Length
- 11 nucleotides
- Bulged bases
- 3J9Z|1|SA|A|1492, 3J9Z|1|SA|A|1493
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9Z_176 not in the Motif Atlas
- Homologous match to IL_4LFB_058
- Geometric discrepancy: 0.5743
- The information below is about IL_4LFB_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J9Z|1|SA|G|1405
3J9Z|1|SA|U|1406
3J9Z|1|SA|C|1407
3J9Z|1|SA|A|1408
3J9Z|1|SA|C|1409
*
3J9Z|1|SA|G|1491
3J9Z|1|SA|A|1492
3J9Z|1|SA|A|1493
3J9Z|1|SA|G|1494
3J9Z|1|SA|U|1495
3J9Z|1|SA|C|1496
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain S1
- Elongation factor G
- Chain S6
- Transfer RNA; tRNA
- Chain SL
- 30S ribosomal protein S12
Coloring options: