3D structure

PDB id
3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GGUUAAUUGAUG*UUGAUCGAAGCC
Length
24 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J9Z|1|LA|G|1849
3J9Z|1|LA|G|1850
3J9Z|1|LA|U|1851
3J9Z|1|LA|U|1852
3J9Z|1|LA|A|1853
3J9Z|1|LA|A|1854
3J9Z|1|LA|U|1855
3J9Z|1|LA|U|1856
3J9Z|1|LA|G|1857
3J9Z|1|LA|A|1858
3J9Z|1|LA|U|1859
3J9Z|1|LA|G|1860
*
3J9Z|1|LA|U|1882
3J9Z|1|LA|U|1883
3J9Z|1|LA|G|1884
3J9Z|1|LA|A|1885
3J9Z|1|LA|U|1886
3J9Z|1|LA|C|1887
3J9Z|1|LA|G|1888
3J9Z|1|LA|A|1889
3J9Z|1|LA|A|1890
3J9Z|1|LA|G|1891
3J9Z|1|LA|C|1892
3J9Z|1|LA|C|1893

Current chains

Chain LA
23S ribosomal RNA

Nearby chains

Chain LC
50S ribosomal protein L1
Chain S7
Transfer RNA; tRNA
Chain SA
Small subunit ribosomal RNA; SSU rRNA

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