IL_3J9Z_217

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J9Z_217 not in the Motif Atlas

Homologous match to IL_6CZR_405

Geometric discrepancy: 0.4193

The information below is about IL_6CZR_405

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47074.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

3J9Z|1|SA|U|249
3J9Z|1|SA|A|250
3J9Z|1|SA|G|251
3J9Z|1|SA|U|252
*
3J9Z|1|SA|A|274
3J9Z|1|SA|G|275

Current chains

Chain SA

16S ribosomal RNA

Nearby chains

Chain SQ

30S ribosomal protein S17