IL_3JA1_009

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JA1_009 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.4734

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

3JA1|1|LA|C|274
3JA1|1|LA|C|275
3JA1|1|LA|U|276
3JA1|1|LA|G|277
3JA1|1|LA|A|278
3JA1|1|LA|A|279
3JA1|1|LA|U|280
3JA1|1|LA|C|281
*
3JA1|1|LA|G|359
3JA1|1|LA|U|360
3JA1|1|LA|G|361
3JA1|1|LA|A|362
3JA1|1|LA|G|363

Current chains

Chain LA

23S ribosomal RNA

Nearby chains