IL_3JA1_048
3D structure
- PDB id
- 3JA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGUU*AC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JA1_048 not in the Motif Atlas
- Homologous match to IL_4WF9_049
- Geometric discrepancy: 0.2088
- The information below is about IL_4WF9_049
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_50694.7
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 27
Unit IDs
3JA1|1|LA|G|1310
3JA1|1|LA|G|1311
3JA1|1|LA|U|1312
3JA1|1|LA|U|1313
*
3JA1|1|LA|A|1603
3JA1|1|LA|C|1604
Current chains
- Chain LA
- 23S ribosomal RNA
Nearby chains
- Chain L5
- 50S ribosomal protein L34
- Chain LV
- 50S ribosomal protein L23
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