IL_3JA1_076
3D structure
- PDB id
- 3JA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GC*GCAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JA1_076 not in the Motif Atlas
- Geometric match to IL_1U9S_003
- Geometric discrepancy: 0.2487
- The information below is about IL_1U9S_003
- Detailed Annotation
- Major groove intercalation
- Broad Annotation
- Major groove intercalation
- Motif group
- IL_82107.5
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 31
Unit IDs
3JA1|1|LA|G|1933
3JA1|1|LA|C|1934
*
3JA1|1|LA|G|1964
3JA1|1|LA|C|1965
3JA1|1|LA|A|1966
3JA1|1|LA|C|1967
Current chains
- Chain LA
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: