IL_3JA1_077

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAAAUUCCUUGUC*GACCUG

Length

20 nucleotides

Bulged bases

3JA1|1|LA|A|1938, 3JA1|1|LA|U|1944

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JA1|1|LA|C|1934
3JA1|1|LA|G|1935
3JA1|1|LA|A|1936
3JA1|1|LA|A|1937
3JA1|1|LA|A|1938
3JA1|1|LA|U|1939
3JA1|1|LA|U|1940
3JA1|1|LA|C|1941
3JA1|1|LA|C|1942
3JA1|1|LA|U|1943
3JA1|1|LA|U|1944
3JA1|1|LA|G|1945
3JA1|1|LA|U|1946
3JA1|1|LA|C|1947
*
3JA1|1|LA|G|1959
3JA1|1|LA|A|1960
3JA1|1|LA|C|1961
3JA1|1|LA|C|1962
3JA1|1|LA|U|1963
3JA1|1|LA|G|1964

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LD

50S ribosomal protein L2

Chain SA

Small subunit ribosomal RNA; SSU rRNA