IL_3JA1_112

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CC*GAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JA1_112 not in the Motif Atlas

Geometric match to IL_8VTW_072

Geometric discrepancy: 0.361

The information below is about IL_8VTW_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_88739.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

3JA1|1|LB|C|30
3JA1|1|LB|C|31
*
3JA1|1|LB|G|51
3JA1|1|LB|A|52
3JA1|1|LB|A|53
3JA1|1|LB|G|54

Current chains

Chain LB

5S ribosomal RNA

Nearby chains

Chain LG

50S ribosomal protein L5

Chain LQ

50S ribosomal protein L18