IL_3JA1_119

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAA*UG

Length

6 nucleotides

Bulged bases

3JA1|1|SA|G|64, 3JA1|1|SA|A|65

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JA1_119 not in the Motif Atlas

Homologous match to IL_6CZR_117

Geometric discrepancy: 0.2721

The information below is about IL_6CZR_117

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.3

Basepair signature

cWW-cWW

Number of instances in this motif group

30

Unit IDs

3JA1|1|SA|C|63
3JA1|1|SA|G|64
3JA1|1|SA|A|65
3JA1|1|SA|A|66
*
3JA1|1|SA|U|103
3JA1|1|SA|G|104

Current chains

Chain SA

16S ribosomal RNA

Nearby chains

Chain ST

30S ribosomal protein S20