IL_3JA1_155

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

3JA1|1|SA|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JA1_155 not in the Motif Atlas

Homologous match to IL_5J7L_040

Geometric discrepancy: 0.2581

The information below is about IL_5J7L_040

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

3JA1|1|SA|G|925
3JA1|1|SA|G|926
3JA1|1|SA|G|927
*
3JA1|1|SA|U|1390
3JA1|1|SA|U|1391

Current chains

Chain SA

16S ribosomal RNA

Nearby chains

Chain S1

mRNA

Chain SG

30S ribosomal protein S7