IL_3JA1_185

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAACUAGG*CUGUC

Length

14 nucleotides

Bulged bases

3JA1|1|LA|G|1992

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JA1_185 not in the Motif Atlas

Homologous match to IL_4WF9_117

Geometric discrepancy: 0.1586

The information below is about IL_4WF9_117

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22854.4

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

7

Unit IDs

3JA1|1|LA|G|1666
3JA1|1|LA|G|1667
3JA1|1|LA|A|1668
3JA1|1|LA|A|1669
3JA1|1|LA|C|1670
3JA1|1|LA|U|1671
3JA1|1|LA|A|1672
3JA1|1|LA|G|1673
3JA1|1|LA|G|1674
*
3JA1|1|LA|C|1990
3JA1|1|LA|U|1991
3JA1|1|LA|G|1992
3JA1|1|LA|U|1993
3JA1|1|LA|C|1994

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LE

50S ribosomal protein L3

Chain LM

50S ribosomal protein L14