IL_3JA1_187

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGUUAAUUGAUG*UUGAUCGAAGCC

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JA1|1|LA|G|1849
3JA1|1|LA|G|1850
3JA1|1|LA|U|1851
3JA1|1|LA|U|1852
3JA1|1|LA|A|1853
3JA1|1|LA|A|1854
3JA1|1|LA|U|1855
3JA1|1|LA|U|1856
3JA1|1|LA|G|1857
3JA1|1|LA|A|1858
3JA1|1|LA|U|1859
3JA1|1|LA|G|1860
*
3JA1|1|LA|U|1882
3JA1|1|LA|U|1883
3JA1|1|LA|G|1884
3JA1|1|LA|A|1885
3JA1|1|LA|U|1886
3JA1|1|LA|C|1887
3JA1|1|LA|G|1888
3JA1|1|LA|A|1889
3JA1|1|LA|A|1890
3JA1|1|LA|G|1891
3JA1|1|LA|C|1892
3JA1|1|LA|C|1893

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LC

50S ribosomal protein L1

Chain S2

Transfer RNA; tRNA