IL_3JA1_196

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GG*UGC

Length

5 nucleotides

Bulged bases

3JA1|1|SA|G|94

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JA1_196 not in the Motif Atlas

Homologous match to IL_5J7L_395

Geometric discrepancy: 0.3028

The information below is about IL_5J7L_395

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

3JA1|1|SA|G|75
3JA1|1|SA|G|76
*
3JA1|1|SA|U|93
3JA1|1|SA|G|94
3JA1|1|SA|C|95

Current chains

Chain SA

16S ribosomal RNA

Nearby chains