IL_3JAG_133
3D structure
- PDB id
- 3JAG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- UUGA*UACA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAG_133 not in the Motif Atlas
- Homologous match to IL_8C3A_109
- Geometric discrepancy: 0.2521
- The information below is about IL_8C3A_109
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
3JAG|1|5|U|4295
3JAG|1|5|U|4296
3JAG|1|5|G|4297
3JAG|1|5|A|4298
*
3JAG|1|5|U|4312
3JAG|1|5|A|4313
3JAG|1|5|C|4314
3JAG|1|5|A|4315
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain D
- uL18
- Chain Q
- eL18
- Chain T
- eL21
- Chain b
- eL29
- Chain o
- eL42
Coloring options: