IL_3JAG_281

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GUCC*GUC

Length

7 nucleotides

Bulged bases

3JAG|1|5|C|4771

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JAG_281 not in the Motif Atlas

Geometric match to IL_8VTW_096

Geometric discrepancy: 0.2228

The information below is about IL_8VTW_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54650.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

3JAG|1|5|G|4769
3JAG|1|5|U|4770
3JAG|1|5|C|4771
3JAG|1|5|C|4772
*
3JAG|1|5|G|4863
3JAG|1|5|U|4864
3JAG|1|5|C|4865

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain H

uL6

Chain O

uL13