IL_3JAH_182

3D structure

PDB id

3JAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

GAUUAAG*CGC

Length

10 nucleotides

Bulged bases

3JAH|1|9|A|46

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JAH_182 not in the Motif Atlas

Geometric match to IL_4V88_387

Geometric discrepancy: 0.1192

The information below is about IL_4V88_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77761.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

3JAH|1|9|G|41
3JAH|1|9|A|42
3JAH|1|9|U|43
3JAH|1|9|U|44
3JAH|1|9|A|45
3JAH|1|9|A|46
3JAH|1|9|G|47
*
3JAH|1|9|C|479
3JAH|1|9|G|480
3JAH|1|9|C|481

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain XX

uS12

Chain jj

ABCE1