Motif IL_77761.1 Version IL_77761.1 of this group appears in releases 3.89 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 1-9 | 5-8 | 6-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V88_387 | 4V88 | 0.0000 | 1 | A6 | SSU rRNA | G | 42 | A | 43 | U | 44 | U | 45 | A | 46 | G | 48 | * | C | 431 | G | 432 | C | 433 | cWW | ntSs | cWW |
| 2 | IL_8C3A_395 | 8C3A | 0.0809 | 1 | CM | SSU rRNA | G | 42 | A | 43 | U | 44 | U | 45 | A | 46 | G | 48 | * | C | 429 | G | 430 | C | 431 | cWW | ntSs | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUUAAG*CGC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUUAA*G | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Heat map statistics
- Min 0.08 | Avg 0.04 | Max 0.08
Coloring options: