IL_3JAH_190
3D structure
- PDB id
- 3JAH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.45 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 3JAH|1|9|U|172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAH_190 not in the Motif Atlas
- Homologous match to IL_4V88_394
- Geometric discrepancy: 0.1289
- The information below is about IL_4V88_394
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
3JAH|1|9|G|145
3JAH|1|9|G|146
3JAH|1|9|A|147
3JAH|1|9|U|148
3JAH|1|9|A|149
3JAH|1|9|A|150
3JAH|1|9|C|151
*
3JAH|1|9|G|167
3JAH|1|9|C|168
3JAH|1|9|U|169
3JAH|1|9|A|170
3JAH|1|9|A|171
3JAH|1|9|U|172
3JAH|1|9|A|173
3JAH|1|9|C|174
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain GG
- eS6
- Chain YY
- eS24
Coloring options: