IL_3JAH_220

3D structure

PDB id

3JAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

GAC*GUUU

Length

7 nucleotides

Bulged bases

3JAH|1|9|U|1016

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JAH_220 not in the Motif Atlas

Geometric match to IL_1NBS_006

Geometric discrepancy: 0.2254

The information below is about IL_1NBS_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

3JAH|1|9|G|925
3JAH|1|9|A|926
3JAH|1|9|C|927
*
3JAH|1|9|G|1014
3JAH|1|9|U|1015
3JAH|1|9|U|1016
3JAH|1|9|U|1017

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain NN

uS15

Chain bb

eS27