IL_3JAH_258

3D structure

PDB id

3JAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

3JAH|1|9|C|1701, 3JAH|1|9|A|1835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JAH_258 not in the Motif Atlas

Homologous match to IL_4V88_463

Geometric discrepancy: 0.1946

The information below is about IL_4V88_463

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

3JAH|1|9|C|1700
3JAH|1|9|C|1701
3JAH|1|9|G|1702
*
3JAH|1|9|C|1833
3JAH|1|9|A|1834
3JAH|1|9|A|1835
3JAH|1|9|G|1836

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain 2

Transfer RNA; tRNA

Chain aa

eS26

Chain hh

mRNA

Chain ii

eRF1