IL_3JAI_106
3D structure
- PDB id
- 3JAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- CGUAAC*GGAUAAG
- Length
- 13 nucleotides
- Bulged bases
- 3JAI|1|5|U|2880
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAI_106 not in the Motif Atlas
- Geometric match to IL_4V9F_063
- Geometric discrepancy: 0.0948
- The information below is about IL_4V9F_063
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_47346.2
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
3JAI|1|5|C|2867
3JAI|1|5|G|2868
3JAI|1|5|U|2869
3JAI|1|5|A|2870
3JAI|1|5|A|2871
3JAI|1|5|C|2872
*
3JAI|1|5|G|2877
3JAI|1|5|G|2878
3JAI|1|5|A|2879
3JAI|1|5|U|2880
3JAI|1|5|A|2881
3JAI|1|5|A|2882
3JAI|1|5|G|2883
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 9
- Small subunit ribosomal RNA; SSU rRNA
- Chain n
- eL41
- Chain p
- eL43
Coloring options: