IL_3JAI_138
3D structure
- PDB id
- 3JAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- CUC*GUGAG
- Length
- 8 nucleotides
- Bulged bases
- 3JAI|1|5|G|4522, 3JAI|1|5|A|4523
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAI_138 not in the Motif Atlas
- Geometric match to IL_5TBW_108
- Geometric discrepancy: 0.0942
- The information below is about IL_5TBW_108
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_54650.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
3JAI|1|5|C|4456
3JAI|1|5|U|4457
3JAI|1|5|C|4458
*
3JAI|1|5|G|4520
3JAI|1|5|U|4521
3JAI|1|5|G|4522
3JAI|1|5|A|4523
3JAI|1|5|G|4524
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 1
- peptide
- Chain B
- uL3
- Chain V
- uL14
- Chain ii
- eRF1
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