IL_3JAI_213
3D structure
- PDB id
- 3JAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- AC*GAAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAI_213 not in the Motif Atlas
- Homologous match to IL_4V88_423
- Geometric discrepancy: 0.1344
- The information below is about IL_4V88_423
- Detailed Annotation
- Major groove minor groove platform; mini C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_68140.1
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 19
Unit IDs
3JAI|1|9|A|802
3JAI|1|9|C|803
*
3JAI|1|9|G|860
3JAI|1|9|A|861
3JAI|1|9|A|862
3JAI|1|9|U|863
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain HH
- eS7
- Chain LL
- uS17
- Chain WW
- uS8
- Chain XX
- uS12
Coloring options: