IL_3JAI_245

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

UA*UUA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JAI_245 not in the Motif Atlas

Geometric match to IL_4LFB_041

Geometric discrepancy: 0.2668

The information below is about IL_4LFB_041

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

3JAI|1|9|U|1400
3JAI|1|9|A|1401
*
3JAI|1|9|U|1444
3JAI|1|9|U|1445
3JAI|1|9|A|1446

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain QQ

uS9

Chain UU

uS10

Chain gg

RACK1