IL_3JAJ_267
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GGGCGC*GGCCC
- Length
- 11 nucleotides
- Bulged bases
- 3JAJ|1|5|G|2652
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAJ_267 not in the Motif Atlas
- Geometric match to IL_7VYX_008
- Geometric discrepancy: 0.3336
- The information below is about IL_7VYX_008
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.1
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
3JAJ|1|5|G|2648
3JAJ|1|5|G|2649
3JAJ|1|5|G|2650
3JAJ|1|5|C|2651
3JAJ|1|5|G|2652
3JAJ|1|5|C|2653
*
3JAJ|1|5|G|2681
3JAJ|1|5|G|2682
3JAJ|1|5|C|2683
3JAJ|1|5|C|2684
3JAJ|1|5|C|2685
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain g
- Ribosomal protein eL34
- Chain p
- Ribosomal protein eL43
Coloring options: