3D structure

PDB id
3JAM (explore in PDB, NAKB, or RNA 3D Hub)
Description
CryoEM structure of 40S-eIF1A-eIF1 complex from yeast
Experimental method
ELECTRON MICROSCOPY
Resolution
3.46 Å

Loop

Sequence
AC*GAAU
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_67987.1
Basepair signature
cWW-cSW-cWW
Number of instances in this motif group
30

Unit IDs

3JAM|1|2|A|746
3JAM|1|2|C|747
*
3JAM|1|2|G|801
3JAM|1|2|A|802
3JAM|1|2|A|803
3JAM|1|2|U|804

Current chains

Chain 2
18S rRNA

Nearby chains

Chain H
eS7
Chain L
uS17
Chain W
uS8
Chain X
uS12

Coloring options:

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