IL_3JAN_042

3D structure

PDB id

3JAN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the scanning state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GAAGGU*GUUACAGC

Length

14 nucleotides

Bulged bases

3JAN|1|5|G|748

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAN|1|5|G|745
3JAN|1|5|A|746
3JAN|1|5|A|747
3JAN|1|5|G|748
3JAN|1|5|G|749
3JAN|1|5|U|750
*
3JAN|1|5|G|912
3JAN|1|5|U|913
3JAN|1|5|U|914
3JAN|1|5|A|915
3JAN|1|5|C|916
3JAN|1|5|A|917
3JAN|1|5|G|918
3JAN|1|5|C|919

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain M

Ribosomal protein eL14

Chain S

Ribosomal protein eL20