IL_3JAN_069

3D structure

PDB id

3JAN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the scanning state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

AGGUCUUGG*UCAACCU

Length

16 nucleotides

Bulged bases

3JAN|1|5|U|1754

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAN|1|5|A|1751
3JAN|1|5|G|1752
3JAN|1|5|G|1753
3JAN|1|5|U|1754
3JAN|1|5|C|1755
3JAN|1|5|U|1756
3JAN|1|5|U|1757
3JAN|1|5|G|1758
3JAN|1|5|G|1759
*
3JAN|1|5|U|1773
3JAN|1|5|C|1774
3JAN|1|5|A|1775
3JAN|1|5|A|1776
3JAN|1|5|C|1777
3JAN|1|5|C|1778
3JAN|1|5|U|1779

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain D

Ribosomal protein uL18

Chain I

Ribosomal protein uL16