IL_3JAN_192
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GCU*AAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAN_192 not in the Motif Atlas
- Geometric match to IL_1KFO_003
- Geometric discrepancy: 0.1525
- The information below is about IL_1KFO_003
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_44258.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 259
Unit IDs
3JAN|1|S2|G|673
3JAN|1|S2|C|674
3JAN|1|S2|U|675
*
3JAN|1|S2|A|1030
3JAN|1|S2|A|1031
3JAN|1|S2|C|1032
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain SN
- Ribosomal protein uS15
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