IL_3JAN_243

3D structure

PDB id

3JAN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the scanning state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CUAAGUU*AUCAGUAG

Length

15 nucleotides

Bulged bases

3JAN|1|4|G|232||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAN|1|4|C|116
3JAN|1|4|U|117
3JAN|1|4|A|118||A
3JAN|1|4|A|119||A
3JAN|1|4|G|120
3JAN|1|4|U|121
3JAN|1|4|U|122
*
3JAN|1|4|A|228
3JAN|1|4|U|229
3JAN|1|4|C|230||A
3JAN|1|4|A|231||A
3JAN|1|4|G|232||A
3JAN|1|4|U|233||A
3JAN|1|4|A|234
3JAN|1|4|G|235

Current chains

Chain 4

SRP 7S RNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain 6

SRP68