IL_3JAN_248

3D structure

PDB id

3JAN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the scanning state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CGGGUCCG*CGGCCG

Length

14 nucleotides

Bulged bases

3JAN|1|5|C|485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAN|1|5|C|480
3JAN|1|5|G|481
3JAN|1|5|G|482
3JAN|1|5|G|483
3JAN|1|5|U|484
3JAN|1|5|C|485
3JAN|1|5|C|486
3JAN|1|5|G|487
*
3JAN|1|5|C|669
3JAN|1|5|G|670
3JAN|1|5|G|671
3JAN|1|5|C|672
3JAN|1|5|C|673
3JAN|1|5|G|674

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain r

Ribosomal protein eL28