IL_3JAN_281
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CGGGGUUUCGUACGUA*UAUUGAAAGUCAGCCCUCG
- Length
- 35 nucleotides
- Bulged bases
- 3JAN|1|5|G|5041, 3JAN|1|5|G|5049, 3JAN|1|5|C|5054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAN|1|5|C|4996
3JAN|1|5|G|4997
3JAN|1|5|G|4998
3JAN|1|5|G|4999
3JAN|1|5|G|5000
3JAN|1|5|U|5001
3JAN|1|5|U|5002
3JAN|1|5|U|5003
3JAN|1|5|C|5004
3JAN|1|5|G|5005
3JAN|1|5|U|5006
3JAN|1|5|A|5007
3JAN|1|5|C|5008
3JAN|1|5|G|5009
3JAN|1|5|U|5010
3JAN|1|5|A|5011
*
3JAN|1|5|U|5037
3JAN|1|5|A|5038
3JAN|1|5|U|5039
3JAN|1|5|U|5040
3JAN|1|5|G|5041
3JAN|1|5|A|5042
3JAN|1|5|A|5043
3JAN|1|5|A|5044
3JAN|1|5|G|5045
3JAN|1|5|U|5046
3JAN|1|5|C|5047
3JAN|1|5|A|5048
3JAN|1|5|G|5049
3JAN|1|5|C|5050
3JAN|1|5|C|5051
3JAN|1|5|C|5052
3JAN|1|5|U|5053
3JAN|1|5|C|5054
3JAN|1|5|G|5055
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- Ribosomal protein uL3
- Chain W
- Ribosomal protein eL24
- Chain d
- Ribosomal protein eL31
Coloring options: