IL_3JAN_286

3D structure

PDB id

3JAN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the scanning state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

UCCUUUG*CAUUCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAN|1|S2|U|116
3JAN|1|S2|C|117
3JAN|1|S2|C|118
3JAN|1|S2|U|119
3JAN|1|S2|U|120
3JAN|1|S2|U|121
3JAN|1|S2|G|122
*
3JAN|1|S2|C|342
3JAN|1|S2|A|343
3JAN|1|S2|U|344
3JAN|1|S2|U|345
3JAN|1|S2|C|346
3JAN|1|S2|G|347

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

Ribosomal protein eS4

Chain SI

Ribosomal protein eS8