IL_3JAN_294
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GCUCGUAGUU*AAUCAAGAAC
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAN|1|S2|G|673
3JAN|1|S2|C|674
3JAN|1|S2|U|675
3JAN|1|S2|C|676
3JAN|1|S2|G|677
3JAN|1|S2|U|678
3JAN|1|S2|A|679
3JAN|1|S2|G|680
3JAN|1|S2|U|681
3JAN|1|S2|U|682
*
3JAN|1|S2|A|1023
3JAN|1|S2|A|1024
3JAN|1|S2|U|1025
3JAN|1|S2|C|1026
3JAN|1|S2|A|1027
3JAN|1|S2|A|1028
3JAN|1|S2|G|1029
3JAN|1|S2|A|1030
3JAN|1|S2|A|1031
3JAN|1|S2|C|1032
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain SL
- Ribosomal protein uS17
- Chain SN
- Ribosomal protein uS15
- Chain SW
- Ribosomal protein uS8
- Chain SX
- Ribosomal protein uS12
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