3D structure

PDB id
3JAN (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the scanning state of the mammalian SRP-ribosome complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.75 Å

Loop

Sequence
GGAUUCAACC*GGCGCAUUUCC
Length
21 nucleotides
Bulged bases
3JAN|1|5|A|686
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAN|1|5|G|464
3JAN|1|5|G|465
3JAN|1|5|A|466
3JAN|1|5|U|467
3JAN|1|5|U|468
3JAN|1|5|C|469
3JAN|1|5|A|470
3JAN|1|5|A|471
3JAN|1|5|C|472
3JAN|1|5|C|473
*
3JAN|1|5|G|681
3JAN|1|5|G|682
3JAN|1|5|C|683
3JAN|1|5|G|684
3JAN|1|5|C|685
3JAN|1|5|A|686
3JAN|1|5|U|687
3JAN|1|5|U|688
3JAN|1|5|U|689
3JAN|1|5|C|690
3JAN|1|5|C|691

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain E
Ribosomal protein eL6
Chain r
Ribosomal protein eL28

Coloring options:

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