IL_3JBN_015
3D structure
- PDB id
- 3JBN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UUUUGA*UG
- Length
- 8 nucleotides
- Bulged bases
- 3JBN|1|A|U|326, 3JBN|1|A|U|327
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBN_015 not in the Motif Atlas
- Geometric match to IL_5Y58_001
- Geometric discrepancy: 0.354
- The information below is about IL_5Y58_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37738.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
3JBN|1|A|U|324
3JBN|1|A|U|325
3JBN|1|A|U|326
3JBN|1|A|U|327
3JBN|1|A|G|328
3JBN|1|A|A|329
*
3JBN|1|A|U|351
3JBN|1|A|G|352
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain AT
- 60S ribosomal protein eL19
- Chain L
- 40S ribosomal protein eS8
- Chain V
- 40S ribosomal protein uS17
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