IL_3JBN_090

3D structure

PDB id

3JBN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CGUUUGG*CCUUUCG

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBN|1|AA|C|129
3JBN|1|AA|G|130
3JBN|1|AA|U|131
3JBN|1|AA|U|132
3JBN|1|AA|U|133
3JBN|1|AA|G|134
3JBN|1|AA|G|135
*
3JBN|1|AA|C|142
3JBN|1|AA|C|143
3JBN|1|AA|U|144
3JBN|1|AA|U|145
3JBN|1|AA|U|146
3JBN|1|AA|C|147
3JBN|1|AA|G|148

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain A3

60S ribosomal protein uL29

Chain AJ

60S ribosomal protein eL8

Chain AY

60S ribosomal protein uL23

Chain Ac

60S ribosomal protein eL37