IL_3JBN_103

3D structure

PDB id

3JBN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

UUUCA*UUCUUCAA

Length

13 nucleotides

Bulged bases

3JBN|1|AA|U|530, 3JBN|1|AA|U|620

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBN|1|AA|U|529
3JBN|1|AA|U|530
3JBN|1|AA|U|531
3JBN|1|AA|C|532
3JBN|1|AA|A|533
*
3JBN|1|AA|U|619
3JBN|1|AA|U|620
3JBN|1|AA|C|621
3JBN|1|AA|U|622
3JBN|1|AA|U|623
3JBN|1|AA|C|624
3JBN|1|AA|A|625
3JBN|1|AA|A|626

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain A5

60S ribosomal protein uL30

Chain AF

60S ribosomal protein uL4

Chain AN

60S ribosomal protein eL14

Chain AU

60S ribosomal protein eL20