IL_3JBN_243

3D structure

PDB id

3JBN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

AAAUUAUAUA*UAAAUAAU

Length

18 nucleotides

Bulged bases

3JBN|1|AA|A|3584, 3JBN|1|AA|A|3590, 3JBN|1|AA|U|3616

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBN|1|AA|A|3583
3JBN|1|AA|A|3584
3JBN|1|AA|A|3585
3JBN|1|AA|U|3586
3JBN|1|AA|U|3587
3JBN|1|AA|A|3588
3JBN|1|AA|U|3589
3JBN|1|AA|A|3590
3JBN|1|AA|U|3591
3JBN|1|AA|A|3592
*
3JBN|1|AA|U|3612
3JBN|1|AA|A|3613
3JBN|1|AA|A|3614
3JBN|1|AA|A|3615
3JBN|1|AA|U|3616
3JBN|1|AA|A|3617
3JBN|1|AA|A|3618
3JBN|1|AA|U|3619

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain AH

60S ribosomal protein uL6

Chain AI

60S ribosomal protein eL6

Chain AK

60S ribosomal protein uL13

Chain AN

60S ribosomal protein eL14

Chain AU

60S ribosomal protein eL20