IL_3JBO_006
3D structure
- PDB id
- 3JBO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- UAUAU*AGAAA
- Length
- 10 nucleotides
- Bulged bases
- 3JBO|1|A|U|66
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBO_006 not in the Motif Atlas
- Homologous match to IL_8P9A_379
- Geometric discrepancy: 0.2872
- The information below is about IL_8P9A_379
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21667.2
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
3JBO|1|A|U|64
3JBO|1|A|A|65
3JBO|1|A|U|66
3JBO|1|A|A|67
3JBO|1|A|U|68
*
3JBO|1|A|A|84
3JBO|1|A|G|85
3JBO|1|A|A|86
3JBO|1|A|A|87
3JBO|1|A|A|88
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain 1
- 40S ribosomal protein eS24
- Chain H
- 40S ribosomal protein eS6
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