IL_3JBO_083
3D structure
- PDB id
- 3JBO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- AU*AAUUGU
- Length
- 8 nucleotides
- Bulged bases
- 3JBO|1|AA|U|156
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBO_083 not in the Motif Atlas
- Homologous match to IL_5TBW_007
- Geometric discrepancy: 0.2333
- The information below is about IL_5TBW_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_19724.3
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
3JBO|1|AA|A|123
3JBO|1|AA|U|124
*
3JBO|1|AA|A|153
3JBO|1|AA|A|154
3JBO|1|AA|U|155
3JBO|1|AA|U|156
3JBO|1|AA|G|157
3JBO|1|AA|U|158
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain A3
- 60S ribosomal protein uL29
- Chain AC
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AJ
- 60S ribosomal protein eL8
- Chain AP
- 60S ribosomal protein eL15
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