IL_3JBO_098

3D structure

PDB id

3JBO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UUUCA*UUCUUCAA

Length

13 nucleotides

Bulged bases

3JBO|1|AA|U|530, 3JBO|1|AA|U|620

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBO|1|AA|U|529
3JBO|1|AA|U|530
3JBO|1|AA|U|531
3JBO|1|AA|C|532
3JBO|1|AA|A|533
*
3JBO|1|AA|U|619
3JBO|1|AA|U|620
3JBO|1|AA|C|621
3JBO|1|AA|U|622
3JBO|1|AA|U|623
3JBO|1|AA|C|624
3JBO|1|AA|A|625
3JBO|1|AA|A|626

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain A5

60S ribosomal protein uL30

Chain AF

60S ribosomal protein uL4

Chain AN

60S ribosomal protein eL14

Chain AU

60S ribosomal protein eL20