IL_3JBO_104

3D structure

PDB id

3JBO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

AGAUUUG*CUUUGCAU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBO|1|AA|A|827
3JBO|1|AA|G|828
3JBO|1|AA|A|829
3JBO|1|AA|U|830
3JBO|1|AA|U|831
3JBO|1|AA|U|832
3JBO|1|AA|G|833
*
3JBO|1|AA|C|861
3JBO|1|AA|U|862
3JBO|1|AA|U|863
3JBO|1|AA|U|864
3JBO|1|AA|G|865
3JBO|1|AA|C|866
3JBO|1|AA|A|867
3JBO|1|AA|U|868

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain A4

60S ribosomal protein eL29

Chain AS

60S ribosomal protein eL18