IL_3JBO_141

3D structure

PDB id

3JBO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

AAUA*UUGUAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBO|1|AA|A|1759
3JBO|1|AA|A|1760
3JBO|1|AA|U|1761
3JBO|1|AA|A|1762
*
3JBO|1|AA|U|2090
3JBO|1|AA|U|2091
3JBO|1|AA|G|2092
3JBO|1|AA|U|2093
3JBO|1|AA|A|2094
3JBO|1|AA|U|2095

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain AC

5.8S ribosomal RNA; 5.8S rRNA

Chain AY

60S ribosomal protein uL23

Chain Aa

60S ribosomal protein eL34