IL_3JBO_174
3D structure
- PDB id
- 3JBO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- UAG*UGGG
- Length
- 7 nucleotides
- Bulged bases
- 3JBO|1|AA|G|2945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBO_174 not in the Motif Atlas
- Homologous match to IL_8C3A_100
- Geometric discrepancy: 0.145
- The information below is about IL_8C3A_100
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38958.10
- Basepair signature
- cWW-cWW-cWW-tHS
- Number of instances in this motif group
- 9
Unit IDs
3JBO|1|AA|U|2716
3JBO|1|AA|A|2717
3JBO|1|AA|G|2718
*
3JBO|1|AA|U|2943
3JBO|1|AA|G|2944
3JBO|1|AA|G|2945
3JBO|1|AA|G|2946
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain 7
- Transfer RNA; tRNA
- Chain AD
- 60S ribosomal protein uL2
- Chain AP
- 60S ribosomal protein eL15
- Chain Ai
- 60S ribosomal protein eL44
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